Transcript: ENST00000264010.4 CTCF-001

Description

CCCTC-binding factor (zinc finger protein) [Source:HGNC Symbol;Acc:13723]

Gene Synonyms

MRD21

Location

About this transcript

This transcript has 12 exons, is annotated with 63 domains and features, is associated with 42010 variant alleles and maps to 488 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000264010.4	CTCF-001	3939	727aa	ENSP00000264010.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10841	P49711	NM_006565.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000401394.1	CTCF-002	2978	399aa	ENSP00000384707.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS54029	P49711	NM_001191022.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000566078.1	CTCF-003	1627	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 12, Coding exons: 10, Transcript length: 3,939 bps, Translation length: 727 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P49711

CCDS

This transcript is a member of the Human CCDS set: CCDS10841

Version

ENST00000264010.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000268870 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.