Transcript: ENST00000263377.2 BRD4-001

Description

bromodomain containing 4 [Source:HGNC Symbol;Acc:13575]

Gene Synonyms

CAP, HUNK1, HUNKI, MCAP

Location

Chromosome 19: 15,347,647-15,391,262 reverse strand.

About this transcript

This transcript has 20 exons, is annotated with 43 domains and features, is associated with 29405 variant alleles and maps to 875 oligo probes.

Gene

This transcript is a product of gene ENSG00000141867.13 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000263377.2	BRD4-001	5852	1362aa	ENSP00000263377.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS12328	M0QZD9 M0R0H4 O60885 Q96HN0	NM_058243.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000371835.4	BRD4-002	4614	722aa	ENSP00000360901.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS46004	M0QZD9 M0R0H4 O60885	NM_014299.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000360016.5	BRD4-003	3240	794aa	ENSP00000353112.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		M0QZD9 M0R0H4 O60885	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000594841.1	BRD4-004	1821	572aa	ENSP00000470481.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		M0QZD9 M0R0H4	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000601941.1	BRD4-008	604	105aa	ENSP00000471240.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		M0R0H4	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000597315.1	BRD4-005	892	146aa	ENSP00000470108.1	Nonsense mediated decay		M0QYW0 M0R0H4	-	-
ENST00000602230.1	BRD4-007	751	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000601071.1	BRD4-006	430	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000594066.1	BRD4-011	587	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000595926.1	BRD4-010	582	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000594842.1	BRD4-009	408	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 20, Coding exons: 19, Transcript length: 5,852 bps, Translation length: 1,362 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O60885

CCDS

This transcript is a member of the Human CCDS set: CCDS12328

Version

ENST00000263377.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000465800 (version 3)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000263377.2 BRD4-001

Summary