Transcript: ENST00000263360.6 EED-001

Description

embryonic ectoderm development [Source:HGNC Symbol;Acc:3188]

Gene Synonyms

HEED, WAIT-1, WAIT1

Location

Chromosome 11: 85,955,586-85,989,778 forward strand.

About this transcript

This transcript has 12 exons, is annotated with 16 domains and features, is associated with 15303 variant alleles and maps to 502 oligo probes.

Gene

This transcript is a product of gene ENSG00000074266.13 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000263360.6	EED-001	2223	441aa	ENSP00000263360.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8273	E9PMU3 O75530	NM_003797.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000327320.4	EED-003	2033	400aa	ENSP00000315587.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8274	O75530	NM_152991.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000528180.1	EED-002	1745	361aa	ENSP00000431778.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PJK2 E9PMU3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000351625.6	EED-014	1696	466aa	ENSP00000338186.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PMU3 O75530	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000527888.1	EED-009	1422	106aa	ENSP00000437318.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PMU3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000534595.1	EED-006	713	115aa	ENSP00000436084.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000534564.1	EED-007	2767	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000525244.1	EED-004	1484	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000528250.1	EED-011	1235	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000524673.2	EED-008	1155	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000533228.1	EED-010	528	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 12, Coding exons: 12, Transcript length: 2,223 bps, Translation length: 441 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O75530

CCDS

This transcript is a member of the Human CCDS set: CCDS8273

Version

ENST00000263360.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000393733 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000263360.6 EED-001

Summary