Description
sperm antigen with calponin homology and coiled-coil domains 1 [Source:HGNC Symbol;Acc:30615]
Gene Synonyms
CYTSB, FLJ36955, HCMOGT-1, HCMOGT1, NSP, NSP5
Location
Chromosome 17: 19,990,335-20,218,068 forward strand.
About this transcript
This transcript has 15 exons, is annotated with 21 domains and features, is associated with 102571 variant alleles and maps to 457 oligo probes.
Gene
This transcript is a product of gene ENSG00000128487.12 Show transcript tableHide transcript table
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000395530.2 | SPECC1-004 | 8133 | 987aa | ENSP00000378901.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS42281 | B4DQ24 F5H2Z1 J3QQM0 Q5M775 | NM_001033555.2 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000395529.3 | SPECC1-002 | 4971 | 790aa | ENSP00000378900.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS42280 | J3KRB9 J3KRD8 J3KS18 J3KTI9 J3QQM0 J3QRQ9 J3QS22 J3QSD6 Q5M775 | NM_152904.4 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000261503.5 | SPECC1-018 | 3948 | 1068aa | ENSP00000261503.5 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS32590 | B4DQ24 F5H2Z1 J3KRB9 J3KRD8 J3KS18 J3KTI9 J3QQM0 J3QRQ9 J3QS22 J3QSD6 Q5M775 | NM_001033553.2 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000395527.4 | SPECC1-027 | 3363 | 1068aa | ENSP00000378898.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS32590 | B4DQ24 F5H2Z1 J3KRB9 J3KRD8 J3KS18 J3KTI9 J3QQM0 J3QRQ9 J3QS22 J3QSD6 Q5M775 | NM_001243439.1 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000395522.2 | SPECC1-003 | 2982 | 703aa | ENSP00000378893.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS58531 | J3QQM0 Q5M775 | NM_001243438.1 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000395525.3 | SPECC1-026 | 2536 | 709aa | ENSP00000378896.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS45628 | J3QQM0 Q5M775 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000581399.1 | SPECC1-001 | 2249 | 534aa | ENSP00000462471.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | J3QQM0 | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000536879.1 | SPECC1-201 | 1725 | 408aa | ENSP00000438294.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5H2Z1 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000584527.1 | SPECC1-028 | 940 | 202aa | ENSP00000463799.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | J3QQM0 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000582226.1 | SPECC1-029 | 732 | 167aa | ENSP00000462092.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000581973.2 | SPECC1-016 | 674 | 102aa | ENSP00000464341.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | J3KRB9 J3KRD8 J3KS18 J3KTI9 J3QRQ9 J3QSD6 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000582604.1 | SPECC1-015 | 662 | 21aa | ENSP00000464639.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | J3KS18 J3QSD6 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000583463.1 | SPECC1-020 | 581 | 132aa | ENSP00000464489.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | J3KRB9 J3KRD8 J3KS18 J3KTI9 J3QRQ9 J3QS22 J3QSD6 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000583528.1 | SPECC1-024 | 571 | 78aa | ENSP00000461918.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | J3KRB9 J3KRD8 J3KS18 J3QSD6 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000583482.2 | SPECC1-025 | 570 | 101aa | ENSP00000463006.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | J3KRB9 J3KRD8 J3KS18 J3KTI9 J3QSD6 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000580934.1 | SPECC1-017 | 462 | 73aa | ENSP00000461944.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | J3KRD8 J3KS18 J3QSD6 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000578321.1 | SPECC1-014 | 433 | 19aa | ENSP00000462266.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | J3KS18 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000578153.1 | SPECC1-021 | 195 | 46aa | ENSP00000462987.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000467722.2 | SPECC1-008 | 731 | 25aa | ENSP00000463130.1 | Nonsense mediated decay | J3QKL1 | - | - | |
| ENST00000472876.1 | SPECC1-006 | 614 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000582063.1 | SPECC1-012 | 580 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000413167.2 | SPECC1-007 | 574 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000579688.1 | SPECC1-010 | 461 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000492188.1 | SPECC1-005 | 1190 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |