Transcript: ENST00000259915.8 POU5F1-001

Description

POU class 5 homeobox 1 [Source:HGNC Symbol;Acc:9221]

Gene Synonyms

MGC22487, OCT3, OCT4, OTF-3, OTF3, OTF4, Oct-3, Oct-4, Oct4

Location

Chromosome 6: 31,132,120-31,138,470 reverse strand.

About this transcript

This transcript has 5 exons, is annotated with 24 domains and features, is associated with 2796 variant alleles and maps to 1376 oligo probes.

Gene

This transcript is a product of gene ENSG00000204531.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000513407.1	POU5F1-005	2276	164aa	ENSP00000475512.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F2Z381	NM_001285986.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000471529.2	POU5F1-002	1718	164aa	ENSP00000425083.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F2Z381	NM_203289.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000259915.8	POU5F1-001	1414	360aa	ENSP00000259915.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS34391	B5B8N7 B5B8N8 B5B8N9 B5B8P0 B5B8P1 B5B8P2 B5B8P3 B5B8P4 B5B8P6 B5B8P7 B5B8P8 B5B8P9 B5B8Q0 B5B8Q1 B5B8Q2 B5B8Q4 D2IYK3 F2Z381 Q01860 U3KQH6	NM_002701.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000512818.1	POU5F1-006	1233	164aa	ENSP00000425479.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F2Z381	NM_001173531.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000606567.1	POU5F1-007	1233	190aa	ENSP00000475880.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS47398	F2Z381 U3KQH6	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000441888.3	POU5F1-004	1050	164aa	ENSP00000389359.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F2Z381	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000461401.1	POU5F1-003	791	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 1,414 bps, Translation length: 360 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q01860

CCDS

This transcript is a member of the Human CCDS set: CCDS34391

Version

ENST00000259915.8

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000076413 (version 4)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000259915.8 POU5F1-001

Summary