Transcript: ENST00000256474.2 VHL-001

Description

von Hippel-Lindau tumor suppressor, E3 ubiquitin protein ligase [Source:HGNC Symbol;Acc:12687]

Gene Synonyms

HRCA1, RCA1, VHL1, pVHL

Location

About this transcript

This transcript has 3 exons, is annotated with 7 domains and features, is associated with 10284 variant alleles and maps to 573 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000256474.2	VHL-001	3737	213aa	ENSP00000256474.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2597	A0PJF6 J9Z661 P40337	NM_000551.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000345392.2	VHL-002	2696	172aa	ENSP00000344757.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2598	A0PJF6 J9Z661 P40337	NM_198156.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000477538.1	VHL-003	958	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 3, Transcript length: 3,737 bps, Translation length: 213 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P40337

CCDS

This transcript is a member of the Human CCDS set: CCDS2597

Version

ENST00000256474.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000250559 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.