Transcript: ENST00000236959.9 ATIC-001

Description

5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase [Source:HGNC Symbol;Acc:794]

Gene Synonyms

AICAR, AICARFT, HEL-S-70p, IMPCHASE, PURH

Location

Chromosome 2: 216,176,540-216,214,486 forward strand.

About this transcript

This transcript has 16 exons, is annotated with 14 domains and features, is associated with 18548 variant alleles and maps to 747 oligo probes.

Gene

This transcript is a product of gene ENSG00000138363.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000435675.1	ATIC-007	2275	591aa	ENSP00000415935.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JLK0 F5GWY2 P31939	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000236959.9	ATIC-001	2213	592aa	ENSP00000236959.9	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2398	C9JLK0 F5GWY2 P31939	NM_004044.6	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000540518.1	ATIC-201	2187	533aa	ENSP00000440523.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JLK0 F5GWY2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000426233.1	ATIC-013	713	231aa	ENSP00000401936.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000413174.1	ATIC-009	695	170aa	ENSP00000402393.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JLK0	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000446622.1	ATIC-012	615	200aa	ENSP00000393485.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000442048.1	ATIC-015	433	107aa	ENSP00000391399.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H7BZU3	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000443953.1	ATIC-002	2187	43aa	ENSP00000406792.1	Nonsense mediated decay		F2Z3E8	-	-
ENST00000427397.1	ATIC-008	1046	43aa	ENSP00000394317.1	Nonsense mediated decay		F2Z3E8	-	-
ENST00000444305.1	ATIC-004	569	84aa	ENSP00000388675.1	Nonsense mediated decay		F8WEF0	-	-
ENST00000459796.1	ATIC-011	847	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000479093.1	ATIC-016	772	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000488712.1	ATIC-006	744	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000467388.1	ATIC-014	714	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000478734.1	ATIC-003	486	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 16, Coding exons: 16, Transcript length: 2,213 bps, Translation length: 592 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P31939

CCDS

This transcript is a member of the Human CCDS set: CCDS2398

Version

ENST00000236959.9

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000256610 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000236959.9 ATIC-001

Summary