Transcript: ENST00000006015.3 HOXA11-001

Description

homeobox A11 [Source:HGNC Symbol;Acc:5101]

Gene Synonyms

HOX1, HOX1I

Location

About this transcript

This transcript has 2 exons, is annotated with 14 domains and features, is associated with 2186 variant alleles and maps to 391 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000006015.3	HOXA11-001	2295	313aa	ENSP00000006015.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5411	P31270	NM_005523.5	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000517402.1	HOXA11-002	2137	283aa	ENSP00000448962.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 2, Coding exons: 2, Transcript length: 2,295 bps, Translation length: 313 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P31270

CCDS

This transcript is a member of the Human CCDS set: CCDS5411

Version

ENST00000006015.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000358754 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.