Transcript: ENST00000599649.1 SIGLEC5-002

Gene Synonyms

CD170, CD33L2, OB-BP2, OBBP2, SIGLEC-5

Location

Chromosome 19: 52,115,344-52,150,053 reverse strand.

About this transcript

This transcript has 9 exons, is annotated with 26 domains and features, is associated with 9711 variant alleles and maps to 383 oligo probes.

Gene

This transcript is a product of gene ENSG00000268500.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	RefSeq	Flags
ENST00000429354.3	SIGLEC5-001	1926	551aa	ENSP00000415200.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000599649.1	SIGLEC5-002	1837	551aa	ENSP00000470259.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,

Summary

Statistics

Exons: 9, Coding exons: 9, Transcript length: 1,837 bps, Translation length: 551 residues

Version

ENST00000599649.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Stop codons

This transcript has a variant, rs8108078, that causes a stop codon to be gained in at least 10% of HapMap or 1000 Genome population(s) CSHL-HAPMAP:HapMap-YRI, ESP6500:African_American, CSHL-HAPMAP:HAPMAP-LWK.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000466952 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000599649.1 SIGLEC5-002

Summary