Transcript: ENST00000273308.4 CNPY2-001

Description

canopy FGF signaling regulator 2 [Source:HGNC Symbol;Acc:13529]

Gene Synonyms

Cnpy2, HP10390, MSAP, TMEM4, ZSIG9

Location

Chromosome 12: 56,704,217-56,710,120 reverse strand.

About this transcript

This transcript has 6 exons, is annotated with 6 domains and features, is associated with 2855 variant alleles and maps to 387 oligo probes.

Gene

This transcript is a product of gene ENSG00000257727.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000273308.4	CNPY2-001	1209	182aa	ENSP00000273308.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8914	F8VXJ7 F8W1K5 H0YI18 Q9Y2B0	NM_014255.5	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000551475.1	CNPY2-008	674	168aa	ENSP00000448809.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8VXJ7 F8W1K5	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000551286.1	CNPY2-007	484	102aa	ENSP00000446784.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8W1K5	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000546466.1	CNPY2-011	673	80aa	ENSP00000448333.1	Nonsense mediated decay		H0YI18	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000553191.1	CNPY2-010	621	41aa	ENSP00000449444.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000551720.1	CNPY2-012	586	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000551276.1	CNPY2-009	556	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000546937.1	CNPY2-003	984	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000548013.1	CNPY2-002	817	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000546388.1	CNPY2-004	670	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000553164.1	CNPY2-005	666	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000547570.1	CNPY2-006	624	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 5, Transcript length: 1,209 bps, Translation length: 182 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9Y2B0

CCDS

This transcript is a member of the Human CCDS set: CCDS8914

Version

ENST00000273308.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000408546 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000273308.4 CNPY2-001

Summary