Human (GRCh37.p13)
Description

sialic acid binding Ig-like lectin 12 (gene/pseudogene) [Source:HGNC Symbol;Acc:15482]

Gene Synonyms

S2V, SIGLECL1, SLG, Siglec-12, Siglec-L1, Siglec-XII

Location
About this transcript

This transcript has 8 exons, is annotated with 9 domains and features, is associated with 6145 variant alleles and maps to 282 oligo probes.

Gene
Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeqFlags
ENST00000291707.3SIGLEC12-0012121595aaENSP00000291707.3
 
Protein coding
CCDS12833Q96PQ1 NM_053003.2GENCODE basic
ENST00000598614.1SIGLEC12-0041434477aaENSP00000472873.1
 
Protein coding
CCDS59416Q96PQ1 NM_033329.1GENCODE basic
ENST00000596742.1SIGLEC12-0031791154aaENSP00000469791.1
 
Nonsense mediated decay
M0QYF3 --
Statistics

Exons: 8, Coding exons: 2, Transcript length: 1,791 bps, Translation length: 154 residues

Version

ENST00000596742.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Stop codons

This transcript has a variant, rs16982743, that causes a stop codon to be gained in at least 10% of HapMap or 1000 Genome population(s) CSHL-HAPMAP:HAPMAP-LWK, CSHL-HAPMAP:HAPMAP-ASW, CSHL-HAPMAP:HapMap-YRI, CSHL-HAPMAP:HapMap-CEU, ESP6500:African_American, CSHL-HAPMAP:HAPMAP-TSI, CSHL-HAPMAP:HAPMAP-MKK, ESP6500:European_American.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:
OTTHUMT00000464261 (version 1)