Human (GRCh37.p13)
Description

sialic acid binding Ig-like lectin 12 (gene/pseudogene) [Source:HGNC Symbol;Acc:15482]

Gene Synonyms

S2V, SIGLECL1, SLG, Siglec-12, Siglec-L1, Siglec-XII

Location
About this transcript

This transcript has 8 exons, is annotated with 29 domains and features, is associated with 6151 variant alleles and maps to 273 oligo probes.

Gene
Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeqFlags
ENST00000291707.3SIGLEC12-0012121595aaENSP00000291707.3
 
Protein coding
CCDS12833Q96PQ1 NM_053003.2GENCODE basic
ENST00000598614.1SIGLEC12-0041434477aaENSP00000472873.1
 
Protein coding
CCDS59416Q96PQ1 NM_033329.1GENCODE basic
ENST00000596742.1SIGLEC12-0031791154aaENSP00000469791.1
 
Nonsense mediated decay
M0QYF3 --
Statistics

Exons: 8, Coding exons: 8, Transcript length: 2,121 bps, Translation length: 595 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q96PQ1

CCDS

This transcript is a member of the Human CCDS set: CCDS12833

Version

ENST00000291707.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Stop codons

This transcript has a variant, rs16982743, that causes a stop codon to be gained in at least 10% of HapMap or 1000 Genome population(s) CSHL-HAPMAP:HAPMAP-TSI, CSHL-HAPMAP:HapMap-CEU, ESP6500:African_American, ESP6500:European_American, CSHL-HAPMAP:HAPMAP-MKK, CSHL-HAPMAP:HAPMAP-LWK, CSHL-HAPMAP:HAPMAP-ASW, CSHL-HAPMAP:HapMap-YRI.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:
OTTHUMT00000384641 (version 2)
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.