Transcript: ENST00000398587.2 PCDHGA11-001

Description

protocadherin gamma subfamily A, 11 [Source:HGNC Symbol;Acc:8698]

Gene Synonyms

PC43, PCDH-GAMMA-A11, PCDH-GAMMA-C3, PCDH2

Location

About this transcript

This transcript has 4 exons, is annotated with 51 domains and features, is associated with 41449 variant alleles and maps to 737 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000398587.2	PCDHGA11-001	3936	935aa	ENSP00000381589.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS47294	Q9BT64 Q9UKW1 Q9Y5H2	NM_032092.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000518882.1	PCDHGA11-003	2260	750aa	ENSP00000428333.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS54930	Q9BT64 Q9UKW1 Q9Y5H2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 3,936 bps, Translation length: 935 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9Y5H2

CCDS

This transcript is a member of the Human CCDS set: CCDS47294

Version

ENST00000398587.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000376974 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.