Transcript: ENST00000477657.1 AMY2B-002

Description

amylase, alpha 2B (pancreatic) [Source:HGNC Symbol;Acc:478]

Gene Synonyms

ACTGP4, AMY2, AMY3, HXA

Location

About this transcript

This transcript has 10 exons, is annotated with 12 domains and features, is associated with 13582 variant alleles and maps to 1340 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000361355.4	AMY2B-001	2181	511aa	ENSP00000354610.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS782	C9J2Z5 C9JWK7 P19961	NM_020978.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000453959.1	AMY2B-005	869	86aa	ENSP00000401627.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JWK7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000435302.1	AMY2B-004	832	96aa	ENSP00000391423.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J2Z5 C9JWK7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000477657.1	AMY2B-002	2788	370aa	ENSP00000433347.1	Nonsense mediated decay		B3KTI1 C9J2Z5 C9JWK7	-	-
ENST00000491397.1	AMY2B-003	4716	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000481821.1	AMY2B-007	683	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000462971.1	AMY2B-006	372	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 10, Coding exons: 8, Transcript length: 2,788 bps, Translation length: 370 residues

Version

ENST00000477657.1

Type

Nonsense mediated decay

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000030319 (version 3)