Transcript: ENST00000265857.3 GET4-001

Description

golgi to ER traffic protein 4 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:21690]

Gene Synonyms

C7orf20, CEE, CGI-20, H_NH1244M04.5, TRC35

Location

Chromosome 7: 916,189-936,071 forward strand.

About this transcript

This transcript has 9 exons, is annotated with 6 domains and features, is associated with 15701 variant alleles and maps to 438 oligo probes.

Gene

This transcript is a product of gene ENSG00000239857.2 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000407192.1	GET4-002	4356	274aa	ENSP00000385646.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JPA8 Q7L5D6	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000265857.3	GET4-001	2090	327aa	ENSP00000265857.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5317	C9JPA8 Q7L5D6	NM_015949.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000412734.2	GET4-006	873	148aa	ENSP00000414097.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JPA8	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000441491.1	GET4-003	682	167aa	ENSP00000390288.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JHN8	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000426056.1	GET4-004	502	158aa	ENSP00000407113.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JY46	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000464468.1	GET4-005	676	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000483469.1	GET4-007	370	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 9, Coding exons: 9, Transcript length: 2,090 bps, Translation length: 327 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q7L5D6

CCDS

This transcript is a member of the Human CCDS set: CCDS5317

Version

ENST00000265857.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000231930 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000265857.3 GET4-001

Summary