Transcript: ENST00000430863.1 MROH5-001

Description

maestro heat-like repeat family member 5 [Source:HGNC Symbol;Acc:42976]

Gene Synonyms

FLJ43860

Location

Chromosome 8: 142,443,932-142,517,330 reverse strand.

About this transcript

This transcript has 30 exons, is associated with 34928 variant alleles and maps to 623 oligo probes.

Gene

This transcript is a product of gene ENSG00000226807.2 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	RefSeq	Flags
ENST00000521161.1	MROH5-004	613	110aa	ENSP00000429440.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E5RII6	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000521053.1	MROH5-003	3830	39aa	ENSP00000429433.1	Nonsense mediated decay	E5RFU7	-	-
ENST00000523857.1	MROH5-002	3818	39aa	ENSP00000427945.1	Nonsense mediated decay	E5RFU7	-	-
ENST00000430863.1	MROH5-001	4164	1318aa	ENSP00000431031.1	Pseudogene owing to a SNP/indel but in other individuals/haplotypes/strains the gene is translated.Polymorphic pseudogene	E5RII6	NM_207414.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,

Summary

Statistics

Exons: 30, Coding exons: 30, Transcript length: 4,164 bps, Translation length: 1,318 residues

Version

ENST00000430863.1

Type

Polymorphic pseudogene

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Stop codons

This transcript has a variant, rs6578185, that causes a stop codon to be lost in at least 10% of HapMap or 1000 Genome population(s) CSHL-HAPMAP:HAPMAP-CHD, CSHL-HAPMAP:HapMap-HCB, CSHL-HAPMAP:HAPMAP-MKK, CSHL-HAPMAP:HAPMAP-ASW, CSHL-HAPMAP:HAPMAP-CHB, CSHL-HAPMAP:HapMap-YRI, CSHL-HAPMAP:HapMap-JPT, CSHL-HAPMAP:HAPMAP-GIH, CSHL-HAPMAP:HapMap-CEU, CSHL-HAPMAP:HAPMAP-MEX, CSHL-HAPMAP:HAPMAP-LWK, ESP6500:African_American, CSHL-HAPMAP:HAPMAP-TSI, ESP6500:European_American.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000342412 (version 4)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000430863.1 MROH5-001

Summary