Transcript: ENST00000378643.3 FANCG-001

Description

Fanconi anemia, complementation group G [Source:HGNC Symbol;Acc:3588]

Gene Synonyms

FAG, XRCC9

Location

Chromosome 9: 35,073,835-35,080,013 reverse strand.

About this transcript

This transcript has 14 exons, is annotated with 18 domains and features, is associated with 4207 variant alleles and maps to 633 oligo probes.

Gene

This transcript is a product of gene ENSG00000221829.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000378643.3	FANCG-001	2631	622aa	ENSP00000367910.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6574	C9JSE3 O15287 Q53XM5	NM_004629.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000448890.1	FANCG-003	868	215aa	ENSP00000409607.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JSE3	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000425676.1	FANCG-005	2108	106aa	ENSP00000412793.1	Nonsense mediated decay		F8WC08	-	-
ENST00000476212.1	FANCG-002	484	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000462124.1	FANCG-004	654	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000481254.1	FANCG-008	592	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000474894.1	FANCG-006	572	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000461149.1	FANCG-007	388	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 14, Coding exons: 14, Transcript length: 2,631 bps, Translation length: 622 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O15287

CCDS

This transcript is a member of the Human CCDS set: CCDS6574

Version

ENST00000378643.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000052269 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000378643.3 FANCG-001

Summary