Transcript: ENST00000489432.2 REPIN1-002

Description

replication initiator 1 [Source:HGNC Symbol;Acc:17922]

Gene Synonyms

AP4, H_DJ0584D14.12, RIP60, ZNF464, Zfp464

Location

Chromosome 7: 150,065,889-150,070,034 forward strand.

About this transcript

This transcript has 3 exons, is annotated with 81 domains and features, is associated with 2582 variant alleles and maps to 425 oligo probes.

Gene

This transcript is a product of gene ENSG00000214022.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000397281.2	REPIN1-201	3292	567aa	ENSP00000380451.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS43677	E7EVL6 Q9BWE0	NM_013400.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000479668.1	REPIN1-001	3182	136aa	ENSP00000420578.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J590	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000444957.1	REPIN1-202	2969	567aa	ENSP00000407714.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS43677	E7EVL6 Q9BWE0	NM_001099696.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000425389.2	REPIN1-018	2876	567aa	ENSP00000388287.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS43677	E7EVL6 Q9BWE0	NM_014374.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000540729.1	REPIN1-203	2256	567aa	ENSP00000445016.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS43677	E7EVL6 Q9BWE0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000489432.2	REPIN1-002	2058	624aa	ENSP00000417291.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS47745	C9J3L7 E7EVL6	NM_001099695.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000488943.1	REPIN1-012	1262	393aa	ENSP00000419872.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JYJ8 E7EVL6	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000475514.1	REPIN1-011	1192	366aa	ENSP00000419789.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JZE3 E7EVL6	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000482680.1	REPIN1-006	1029	136aa	ENSP00000417982.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J590	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000466559.1	REPIN1-004	1022	55aa	ENSP00000418507.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J0L4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000519397.1	REPIN1-014	583	146aa	ENSP00000428562.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E7EVL6	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000518514.1	REPIN1-016	478	136aa	ENSP00000428129.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RK52	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000467980.1	REPIN1-009	899	47aa	ENSP00000418279.1	Nonsense mediated decay		C9J7D4	-	-
ENST00000486714.2	REPIN1-013	824	87aa	ENSP00000417786.2	Nonsense mediated decay		C9J7L2	-	-
ENST00000522266.1	REPIN1-017	480	47aa	ENSP00000427721.1	Nonsense mediated decay		C9J7D4	-	-
ENST00000518462.1	REPIN1-019	621	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000473391.1	REPIN1-005	1064	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000469309.1	REPIN1-008	910	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000495535.1	REPIN1-007	672	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000487455.1	REPIN1-003	464	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 2, Transcript length: 2,058 bps, Translation length: 624 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS47745

Version

ENST00000489432.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000350705 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Recent locations

Transcript: ENST00000489432.2 REPIN1-002

Summary