Transcript: ENST00000514262.1 ITGA1-006

Description

integrin, alpha 1 [Source:HGNC Symbol;Acc:6134]

Gene Synonyms

CD49a, VLA1

Location

About this transcript

This transcript has 5 exons, is associated with 1404 variant alleles and maps to 80 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000282588.6	ITGA1-001	10757	1179aa	ENSP00000282588.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3955	P56199	NM_181501.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000504086.1	ITGA1-002	1366	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000513737.1	ITGA1-005	601	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000514262.1	ITGA1-006	556	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000509049.1	ITGA1-007	437	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000506275.1	ITGA1-004	7461	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000504669.1	ITGA1-003	6276	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 0, Transcript length: 556 bps,

Version

ENST00000514262.1

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000367729 (version 1)