Transcript: ENST00000433541.1 TREX1-003

Description

three prime repair exonuclease 1 [Source:HGNC Symbol;Acc:12269]

Gene Synonyms

AGS1, CRV, DRN3, HERNS

Location

Chromosome 3: 48,507,210-48,509,044 forward strand.

About this transcript

This transcript has 4 exons, is annotated with 6 domains and features, is associated with 1383 variant alleles and maps to 392 oligo probes.

Gene

This transcript is a product of gene ENSG00000213689.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000296443.9	TREX1-002	1877	314aa	ENSP00000296443.9	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2769	C9J052 Q5TZT0 Q9NSU2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000422277.2	TREX1-201	1813	369aa	ENSP00000390478.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS43086	C9J052 Q5TZT0 Q9NSU2	NM_016381.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000436480.2	TREX1-202	1493	314aa	ENSP00000392569.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2769	C9J052 Q5TZT0 Q9NSU2	NM_033629.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000444177.1	TREX1-004	1200	304aa	ENSP00000415972.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS59451	C9J052 Q5TZT0 Q9NSU2	NM_007248.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000433541.1	TREX1-003	1105	175aa	ENSP00000412404.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J052	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000456089.1	TREX1-005	629	175aa	ENSP00000411331.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J052	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000492235.1	TREX1-006	696	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000395677.1	TREX1-001	2197	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 1, Transcript length: 1,105 bps, Translation length: 175 residues

Version

ENST00000433541.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000344700 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000433541.1 TREX1-003

Summary