Transcript: ENST00000455580.1 PPP1CB-004

Description

protein phosphatase 1, catalytic subunit, beta isozyme [Source:HGNC Symbol;Acc:9282]

Gene Synonyms

HEL-S-80p, PP-1B, PP1B, PP1beta, PPP1CD

Location

Chromosome 2: 28,974,506-29,006,844 forward strand.

About this transcript

This transcript has 5 exons, is annotated with 12 domains and features, is associated with 15163 variant alleles and maps to 172 oligo probes.

Gene

This transcript is a product of gene ENSG00000213639.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000395366.2	PPP1CB-001	4893	327aa	ENSP00000378769.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS33169	B4DJ75 C4TNW5 C9J9S3 C9JP48 E7ETD8 P62140	NM_002709.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000358506.2	PPP1CB-201	4771	327aa	ENSP00000351298.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS33169	B4DJ75 C4TNW5 C9J9S3 C9JP48 E7ETD8 P62140	NM_206876.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000296122.6	PPP1CB-003	3527	327aa	ENSP00000296122.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS33169	B4DJ75 C4TNW5 C9J9S3 C9JP48 E7ETD8 P62140	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000455580.1	PPP1CB-004	721	169aa	ENSP00000390715.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C4TNW5 E7ETD8	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000441461.1	PPP1CB-005	584	138aa	ENSP00000414918.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J9S3 C9JP48	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000420282.1	PPP1CB-006	570	125aa	ENSP00000398839.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J9S3	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000418910.1	PPP1CB-009	281	82aa	ENSP00000388056.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C4TNW5 H0Y3Y6	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000427786.1	PPP1CB-008	569	64aa	ENSP00000394589.1	Nonsense mediated decay		F8WE71	-	-
ENST00000464273.1	PPP1CB-007	577	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 4, Transcript length: 721 bps, Translation length: 169 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000455580.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000324844 (version 4)

Favourite species

All species

Recent locations

Transcript: ENST00000455580.1 PPP1CB-004

Summary