Transcript: ENST00000338005.6 CCDC183-003

Description

coiled-coil domain containing 183 [Source:HGNC Symbol;Acc:28236]

Gene Synonyms

KIAA1984, MGC15438, PARF, RP11-216L13.9, bA216L13.7

Location

About this transcript

This transcript has 14 exons, is annotated with 4 domains and features, is associated with 6910 variant alleles and maps to 318 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000338005.6	CCDC183-003	1671	534aa	ENSP00000338013.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS43906	Q5T5S1	NM_001039374.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000479371.1	CCDC183-004	1786	318aa	ENSP00000419222.1	Nonsense mediated decay		G5E9W6	-	-
ENST00000371682.3	CCDC183-005	1437	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000496839.1	CCDC183-010	744	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000484858.1	CCDC183-001	422	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000430612.1	CCDC183-009	2321	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000481601.1	CCDC183-006	1556	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000609471.1	CCDC183-011	644	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 14, Coding exons: 14, Transcript length: 1,671 bps, Translation length: 534 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q5T5S1

CCDS

This transcript is a member of the Human CCDS set: CCDS43906

Version

ENST00000338005.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000354899 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.