Transcript: ENST00000605797.1 COLQ-004

Description

collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase [Source:HGNC Symbol;Acc:2226]

Gene Synonyms

EAD

Location

Chromosome 3: 15,507,909-15,540,055 reverse strand.

About this transcript

This transcript has 11 exons, is annotated with 8 domains and features, is associated with 13333 variant alleles and maps to 211 oligo probes.

Gene

This transcript is a product of gene ENSG00000206561.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000383785.2	COLQ-201	3147	291aa	ENSP00000373295.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JBB2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000383788.5	COLQ-001	2991	455aa	ENSP00000373298.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS33709	Q9Y215	NM_005677.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000383787.2	COLQ-202	2978	446aa	ENSP00000373297.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q9Y215	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000435459.2	COLQ-203	2849	445aa	ENSP00000402511.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8WA67	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000383781.4	COLQ-003	2784	445aa	ENSP00000373291.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS46768	Q9Y215	NM_080538.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000603808.1	COLQ-002	1668	456aa	ENSP00000474271.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q9Y215	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000383786.5	COLQ-007	1482	421aa	ENSP00000373296.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS43057	Q9Y215	NM_080539.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000605797.1	COLQ-004	582	194aa	ENSP00000474936.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		S4R408	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000603752.1	COLQ-008	550	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000603469.1	COLQ-005	283	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000604401.1	COLQ-006	721	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 11, Coding exons: 11, Transcript length: 582 bps, Translation length: 194 residues

Incomplete CDS

5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete

Version

ENST00000605797.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000343578 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000605797.1 COLQ-004

Summary