Transcript: ENST00000421593.2 SLCO1B7-001

Description

solute carrier organic anion transporter family, member 1B7 (non-functional) [Source:HGNC Symbol;Acc:32934]

Gene Synonyms

LST-3, LST-3TM12, LST3, LST3TM12, SLC21A21

Location

About this transcript

This transcript has 13 exons, is annotated with 31 domains and features, is associated with 35118 variant alleles and maps to 407 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000554957.1	SLCO1B7-201	2064	687aa	ENSP00000452013.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H094	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000421593.2	SLCO1B7-001	1923	640aa	ENSP00000394168.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS44843	G3V0H7	NM_001009562.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000545916.1	SLCO1B7-003	506	99aa	ENSP00000439857.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YFQ8	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000541784.1	SLCO1B7-002	558	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 13, Coding exons: 13, Transcript length: 1,923 bps, Translation length: 640 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: G3V0H7

CCDS

This transcript is a member of the Human CCDS set: CCDS44843

Version

ENST00000421593.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000402066 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.