Transcript: ENST00000559661.1 EXOC3L4-003

Description

exocyst complex component 3-like 4 [Source:HGNC Symbol;Acc:20120]

Gene Synonyms

C14orf73, RP11-736N17.8

Location

Chromosome 14: 103,570,687-103,576,401 forward strand.

About this transcript

This transcript has 7 exons, is associated with 3298 variant alleles and maps to 249 oligo probes.

Gene

This transcript is a product of gene ENSG00000205436.3 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000380069.3	EXOC3L4-001	2293	722aa	ENSP00000369409.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS32163	Q17RC7	NM_001077594.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000560304.1	EXOC3L4-007	657	212aa	ENSP00000454036.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000559116.1	EXOC3L4-005	460	153aa	ENSP00000454163.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YNV0	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000559661.1	EXOC3L4-003	665	15aa	ENSP00000454174.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000560925.1	EXOC3L4-002	2341	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000559693.1	EXOC3L4-004	813	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000560102.1	EXOC3L4-006	563	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 7, Coding exons: 2, Transcript length: 665 bps, Translation length: 15 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENST00000559661.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000415667 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000559661.1 EXOC3L4-003

Summary