Transcript: ENST00000566482.1 CNEP1R1-004

Description

CTD nuclear envelope phosphatase 1 regulatory subunit 1 [Source:HGNC Symbol;Acc:26759]

Gene Synonyms

C16orf69, FLJ38101, NEP1-R1, TMEM188, TMP125

Location

Chromosome 16: 50,059,175-50,068,579 forward strand.

About this transcript

This transcript has 4 exons, is annotated with 2 domains and features, is associated with 4092 variant alleles and maps to 101 oligo probes.

Gene

This transcript is a product of gene ENSG00000205423.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000458059.3	CNEP1R1-001	2965	142aa	ENSP00000405635.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS45480	H3BMF1 H3BUT5 Q8N9A8	NM_153261.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000427478.2	CNEP1R1-201	2051	125aa	ENSP00000394224.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS61931	B8YCP3 H3BMF1 H3BUT5 Q8N9A8	NM_001281789.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000565556.1	CNEP1R1-003	1707	93aa	ENSP00000457787.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BMF1 H3BUT5	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000562576.1	CNEP1R1-005	656	108aa	ENSP00000454676.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BN40	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000566093.1	CNEP1R1-009	547	80aa	ENSP00000454356.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BMF1	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000568890.1	CNEP1R1-006	1992	47aa	ENSP00000456913.1	Nonsense mediated decay		Q8N9A8	-	-
ENST00000565457.1	CNEP1R1-002	1744	125aa	ENSP00000456686.1	Nonsense mediated decay	CCDS61931	B8YCP3 H3BMF1 H3BUT5 Q8N9A8	-	-
ENST00000566482.1	CNEP1R1-004	826	47aa	ENSP00000456294.1	Nonsense mediated decay		Q8N9A8	-	-
ENST00000389134.5	CNEP1R1-007	579	64aa	ENSP00000373786.5	Nonsense mediated decay		H3BLY8	-	-
ENST00000567712.1	CNEP1R1-010	455	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000569647.1	CNEP1R1-008	363	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 3, Transcript length: 826 bps, Translation length: 47 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8N9A8

Version

ENST00000566482.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000423134 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000566482.1 CNEP1R1-004

Summary