Transcript: ENST00000525291.1 SDHD-005

Description

succinate dehydrogenase complex, subunit D, integral membrane protein [Source:HGNC Symbol;Acc:10683]

Gene Synonyms

CBT1, CII-4, CWS3, PGL, PGL1, QPs3, SDH4, cybS

Location

Chromosome 11: 111,957,623-111,966,112 forward strand.

About this transcript

This transcript has 3 exons, is annotated with 7 domains and features, is associated with 4111 variant alleles and maps to 348 oligo probes.

Gene

This transcript is a product of gene ENSG00000204370.4 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000375549.3	SDHD-001	1439	159aa	ENSP00000364699.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS31678	G3V173 O14521	NM_003002.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000528048.1	SDHD-003	905	85aa	ENSP00000436217.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS60959	E9PQI9	NM_001276503.1	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000526592.1	SDHD-006	861	143aa	ENSP00000432005.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS60958	E9PIG3 G3V173	NM_001276506.1	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000525291.1	SDHD-005	790	120aa	ENSP00000436669.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS60960	E9PIC0	NM_001276504.1	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000528182.1	SDHD-002	754	131aa	ENSP00000435475.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PK73	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000528021.1	SDHD-004	688	104aa	ENSP00000432465.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		G3V173	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000530923.1	SDHD-007	717	101aa	ENSP00000432946.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000534010.1	SDHD-008	460	55aa	ENSP00000433202.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 3, Coding exons: 3, Transcript length: 790 bps, Translation length: 120 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS60960

Version

ENST00000525291.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000392356 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000525291.1 SDHD-005

Summary