Transcript: ENST00000409739.2 TRAF3IP1-003

Description

TNF receptor-associated factor 3 interacting protein 1 [Source:HGNC Symbol;Acc:17861]

Gene Synonyms

DKFZP434F124, MIP-T3, MIPT3

Location

About this transcript

This transcript has 5 exons, is annotated with 2 domains and features, is associated with 4164 variant alleles and maps to 126 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000373327.4	TRAF3IP1-001	4279	691aa	ENSP00000362424.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS33415	Q8TDR0	NM_015650.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000391994.2	TRAF3IP1-201	4172	691aa	ENSP00000375852.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A8MTK4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000391993.3	TRAF3IP1-002	4003	625aa	ENSP00000375851.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS46557	Q8TDR0	NM_001139490.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000409739.2	TRAF3IP1-003	1070	52aa	ENSP00000386648.2	Nonsense mediated decay		H7BZ10	-	-
ENST00000462122.1	TRAF3IP1-004	922	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000483951.1	TRAF3IP1-005	476	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 2, Transcript length: 1,070 bps, Translation length: 52 residues

Version

ENST00000409739.2

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000328314 (version 1)