Description
calpain 8 [Source:HGNC Symbol;Acc:1485]
Gene Synonyms
NCL2, nCL-2
Location
Chromosome 1: 223,711,349-223,716,528 reverse strand.
About this transcript
This transcript has 4 exons, is associated with 2493 variant alleles and maps to 61 oligo probes.
Gene
This transcript is a product of gene ENSG00000203697.7 Show transcript tableHide transcript table
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000366872.5 | CAPN8-201 | 2262 | 681aa | ENSP00000355837.5 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A6NHC0 | - | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000366873.2 | CAPN8-001 | 2596 | 381aa | ENSP00000355838.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B1B154 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000419193.2 | CAPN8-002 | 1399 | 437aa | ENSP00000401665.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B1B153 | NM_001143962.1 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000465098.1 | CAPN8-004 | 710 | 173aa | ENSP00000435953.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000430824.2 | CAPN8-005 | 695 | 156aa | ENSP00000390294.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A3QK37 | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000442247.1 | CAPN8-007 | 327 | 101aa | ENSP00000409233.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A3QK36 | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000467384.2 | CAPN8-003 | 884 | 38aa | ENSP00000434013.1 | Nonsense mediated decay | H0YDN4 | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000484873.2 | CAPN8-006 | 364 | 20aa | ENSP00000436371.1 | Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000482401.2 | CAPN8-008 | 1023 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000525760.1 | CAPN8-009 | 561 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000482183.1 | CAPN8-010 | 475 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |