Transcript: ENST00000555331.1 BAZ1A-012

Description

bromodomain adjacent to zinc finger domain, 1A [Source:HGNC Symbol;Acc:960]

Gene Synonyms

ACF1, WALp1, WCRF180, hACF1

Location

Chromosome 14: 35,222,440-35,230,982 reverse strand.

About this transcript

This transcript has 3 exons, is associated with 4424 variant alleles and maps to 201 oligo probes.

Gene

This transcript is a product of gene ENSG00000198604.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000360310.1	BAZ1A-201	6010	1556aa	ENSP00000353458.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9651	D3DS96 Q9NRL2	NM_013448.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000358716.4	BAZ1A-002	5920	1524aa	ENSP00000351555.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS41943	Q9NRL2	NM_182648.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000382422.2	BAZ1A-001	5775	1556aa	ENSP00000371859.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9651	D3DS96 Q9NRL2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000555331.1	BAZ1A-012	579	12aa	ENSP00000450902.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000554865.1	BAZ1A-010	540	76aa	ENSP00000450923.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000553573.1	BAZ1A-004	445	77aa	ENSP00000451896.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000553853.1	BAZ1A-005	433	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000553385.1	BAZ1A-006	733	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000555273.1	BAZ1A-007	729	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000554391.1	BAZ1A-009	640	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000556314.1	BAZ1A-008	500	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000557739.1	BAZ1A-011	461	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 2, Transcript length: 579 bps, Translation length: 12 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENST00000555331.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000410374 (version 2)

Annotation Attributes

dotter confirmed [Definitions]

Favourite species

All species

Recent locations

Transcript: ENST00000555331.1 BAZ1A-012

Summary