Transcript: ENST00000490242.2 ITGBL1-006

Description

integrin, beta-like 1 (with EGF-like repeat domains) [Source:HGNC Symbol;Acc:6164]

Gene Synonyms

OSCP, TIED

Location

Chromosome 13: 102,250,495-102,370,694 forward strand.

About this transcript

This transcript has 6 exons, is annotated with 24 domains and features, is associated with 54470 variant alleles and maps to 344 oligo probes.

Gene

This transcript is a product of gene ENSG00000198542.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000376180.3	ITGBL1-003	2494	494aa	ENSP00000365351.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9499	B3KTP1 O95965	NM_004791.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000545560.2	ITGBL1-007	2296	353aa	ENSP00000439903.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS61362	B3KTP1	NM_001271754.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000376162.3	ITGBL1-201	1523	401aa	ENSP00000365332.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS61361	B3KTP1 B4DQ02	NM_001271756.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000490242.2	ITGBL1-006	1487	208aa	ENSP00000475328.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000415285.1	ITGBL1-005	429	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000474233.1	ITGBL1-002	514	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 5, Transcript length: 1,487 bps, Translation length: 208 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENST00000490242.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000471112 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000490242.2 ITGBL1-006

Summary