Transcript: ENST00000376180.3 ITGBL1-003

Description

integrin, beta-like 1 (with EGF-like repeat domains) [Source:HGNC Symbol;Acc:6164]

Gene Synonyms

OSCP, TIED

Location

Chromosome 13: 102,104,966-102,368,794 forward strand.

About this transcript

This transcript has 11 exons, is annotated with 45 domains and features, is associated with 117076 variant alleles and maps to 566 oligo probes.

Gene

This transcript is a product of gene ENSG00000198542.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000376180.3	ITGBL1-003	2494	494aa	ENSP00000365351.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9499	B3KTP1 O95965	NM_004791.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000545560.2	ITGBL1-007	2296	353aa	ENSP00000439903.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS61362	B3KTP1	NM_001271754.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000376162.3	ITGBL1-201	1523	401aa	ENSP00000365332.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS61361	B3KTP1 B4DQ02	NM_001271756.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000490242.2	ITGBL1-006	1487	208aa	ENSP00000475328.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000415285.1	ITGBL1-005	429	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000474233.1	ITGBL1-002	514	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 11, Coding exons: 11, Transcript length: 2,494 bps, Translation length: 494 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O95965

CCDS

This transcript is a member of the Human CCDS set: CCDS9499

Version

ENST00000376180.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000045669 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000376180.3 ITGBL1-003

Summary