Transcript: ENST00000361999.3 ITSN2-002

Description

intersectin 2 [Source:HGNC Symbol;Acc:6184]

Gene Synonyms

KIAA1256, PRO2015, SH3D1B, SH3P18, SWA, SWAP

Location

Chromosome 2: 24,425,733-24,583,178 reverse strand.

About this transcript

This transcript has 39 exons, is annotated with 80 domains and features, is associated with 66322 variant alleles and maps to 1117 oligo probes.

Gene

This transcript is a product of gene ENSG00000198399.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000355123.4	ITSN2-001	6300	1697aa	ENSP00000347244.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1710	F8W719 Q53TK4 Q53TM3 Q9NZM3	NM_006277.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000361999.3	ITSN2-002	5814	1670aa	ENSP00000354561.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1711	F8W719 Q53TM3 Q9NZM3	NM_019595.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000406921.3	ITSN2-004	4558	1249aa	ENSP00000384499.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS46230	F8W719 Q9NZM3	NM_147152.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000416160.1	ITSN2-008	3634	120aa	ENSP00000389013.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000412011.1	ITSN2-003	2066	609aa	ENSP00000391224.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E7EPJ2 F8W719	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000443927.1	ITSN2-012	902	183aa	ENSP00000391715.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8W719	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000427234.1	ITSN2-010	974	55aa	ENSP00000395682.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000449392.1	ITSN2-011	252	36aa	ENSP00000411319.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000407704.1	ITSN2-006	597	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000478720.1	ITSN2-005	2035	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000479575.1	ITSN2-009	749	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000469848.1	ITSN2-007	563	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 39, Coding exons: 38, Transcript length: 5,814 bps, Translation length: 1,670 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9NZM3

CCDS

This transcript is a member of the Human CCDS set: CCDS1711

Version

ENST00000361999.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000207621 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000361999.3 ITSN2-002

Summary