Transcript: ENST00000360108.3 CACNA1E-006

Description

calcium channel, voltage-dependent, R type, alpha 1E subunit [Source:HGNC Symbol;Acc:1392]

Gene Synonyms

BII, CACH6, CACNL1A6, Cav2.3

Location

Chromosome 1: 181,452,874-181,768,048 forward strand.

About this transcript

This transcript has 47 exons, is annotated with 71 domains and features, is associated with 128521 variant alleles and maps to 983 oligo probes.

Gene

This transcript is a product of gene ENSG00000198216.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000526775.1	CACNA1E-002	16170	2251aa	ENSP00000434814.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS55665	E9PIE8 Q15878 Q9NY05 Q9UN68	NM_001205294.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000357570.5	CACNA1E-201	9848	2264aa	ENSP00000350183.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3KP11 Q9UN68	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000367570.1	CACNA1E-001	9724	2270aa	ENSP00000356542.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS53443	E9PIE8 Q15878 Q9NY05 Q9UN68	NM_000721.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000367567.4	CACNA1E-203	9719	1877aa	ENSP00000356539.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8W760 Q9UN68	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000358338.5	CACNA1E-202	9662	2202aa	ENSP00000351101.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8W8A2 Q9UN68	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000367573.2	CACNA1E-003	7067	2313aa	ENSP00000356545.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS55664	E9PIE8 Q15878 Q9NY05 Q9NYZ6 Q9UN68	NM_001205293.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000360108.3	CACNA1E-006	6970	2294aa	ENSP00000353222.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PIE8 F8W9Z1 Q9NY05 Q9UN68	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000524607.1	CACNA1E-004	1795	438aa	ENSP00000432038.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PIE8 Q9NY05	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000533229.1	CACNA1E-005	2142	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 47, Coding exons: 47, Transcript length: 6,970 bps, Translation length: 2,294 residues

Version

ENST00000360108.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000394702 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000360108.3 CACNA1E-006

Summary