Transcript: ENST00000310739.4 SZT2-201

Description

seizure threshold 2 homolog (mouse) [Source:HGNC Symbol;Acc:29040]

Gene Synonyms

C1orf84, EIEE18, FLJ10387, FLJ34502, KIAA0467, RP11-506B15.1, RP11-506B15.3, SZT2A, SZT2B

Location

Chromosome 1: 43,855,553-43,872,564 forward strand.

About this transcript

This transcript has 5 exons, is annotated with 2 domains and features, is associated with 7558 variant alleles and maps to 179 oligo probes.

Gene

This transcript is a product of gene ENSG00000198198.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000562955.1	SZT2-004	12281	3375aa	ENSP00000457168.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS30694	Q5T011	NM_015284.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000372442.1	SZT2-202	10217	2533aa	ENSP00000361519.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5T011	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000310739.4	SZT2-201	1196	180aa	ENSP00000312234.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E2QRB6	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000372450.4	SZT2-002	1191	178aa	ENSP00000361528.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5T011	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000406439.2	SZT2-003	2133	168aa	ENSP00000386070.2	Nonsense mediated decay		Q5T011	-	-
ENST00000471177.1	SZT2-008	574	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000460536.1	SZT2-009	4286	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000470139.1	SZT2-005	4098	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000357658.3	SZT2-001	1623	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000478140.1	SZT2-006	543	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000470897.1	SZT2-007	466	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 1,196 bps, Translation length: 180 residues

Version

ENST00000310739.4

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000310739.4 SZT2-201

Summary