Transcript: ENST00000520747.1 FCHSD1-006

Description

FCH and double SH3 domains 1 [Source:HGNC Symbol;Acc:25463]

Gene Synonyms

FLJ00007, NWK2

Location

Chromosome 5: 141,018,870-141,022,188 reverse strand.

About this transcript

This transcript has 2 exons, is associated with 1727 variant alleles and maps to 312 oligo probes.

Gene

This transcript is a product of gene ENSG00000197948.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000435817.2	FCHSD1-001	4320	690aa	ENSP00000399259.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS47295	Q86WN1	NM_033449.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000522126.1	FCHSD1-003	2577	409aa	ENSP00000427796.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q86WN1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000522783.1	FCHSD1-005	2477	598aa	ENSP00000428677.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RGT6	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000519800.1	FCHSD1-002	802	255aa	ENSP00000428776.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RGB1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000518499.1	FCHSD1-011	714	211aa	ENSP00000430448.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RK49	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000523856.1	FCHSD1-004	3932	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000518160.1	FCHSD1-008	719	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000522386.1	FCHSD1-009	581	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000522763.1	FCHSD1-010	443	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000520747.1	FCHSD1-006	3181	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 3,181 bps,

Version

ENST00000520747.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000375283 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000520747.1 FCHSD1-006

Summary