Transcript: ENST00000435817.2 FCHSD1-001

Description

FCH and double SH3 domains 1 [Source:HGNC Symbol;Acc:25463]

Gene Synonyms

FLJ00007, NWK2

Location

Chromosome 5: 141,018,869-141,030,986 reverse strand.

About this transcript

This transcript has 20 exons, is annotated with 26 domains and features, is associated with 6058 variant alleles and maps to 687 oligo probes.

Gene

This transcript is a product of gene ENSG00000197948.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000435817.2	FCHSD1-001	4320	690aa	ENSP00000399259.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS47295	Q86WN1	NM_033449.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000522126.1	FCHSD1-003	2577	409aa	ENSP00000427796.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q86WN1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000522783.1	FCHSD1-005	2477	598aa	ENSP00000428677.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RGT6	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000519800.1	FCHSD1-002	802	255aa	ENSP00000428776.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RGB1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000518499.1	FCHSD1-011	714	211aa	ENSP00000430448.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RK49	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000523856.1	FCHSD1-004	3932	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000518160.1	FCHSD1-008	719	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000522386.1	FCHSD1-009	581	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000522763.1	FCHSD1-010	443	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000520747.1	FCHSD1-006	3181	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 20, Coding exons: 20, Transcript length: 4,320 bps, Translation length: 690 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q86WN1

CCDS

This transcript is a member of the Human CCDS set: CCDS47295

Version

ENST00000435817.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000375282 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000435817.2 FCHSD1-001

Summary