Transcript: ENST00000358105.3 C4orf22-001

Description

chromosome 4 open reading frame 22 [Source:HGNC Symbol;Acc:28554]

Location

About this transcript

This transcript has 6 exons, is annotated with 2 domains and features, is associated with 269842 variant alleles and maps to 312 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000358105.3	C4orf22-001	895	233aa	ENSP00000350818.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3587	Q6V702	NM_152770.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000508675.1	C4orf22-003	753	250aa	ENSP00000425786.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS56336	Q6V702	NM_001206997.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000513920.1	C4orf22-002	3349	156aa	ENSP00000422569.1	Nonsense mediated decay		G5E9Y8	-	-
ENST00000514249.1	C4orf22-004	777	86aa	ENSP00000426308.1	Nonsense mediated decay		E7EPK2	-	-
ENST00000512931.1	C4orf22-005	729	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000502497.1	C4orf22-006	492	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000503883.1	C4orf22-007	429	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000508314.1	C4orf22-008	268	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 6, Transcript length: 895 bps, Translation length: 233 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q6V702

CCDS

This transcript is a member of the Human CCDS set: CCDS3587

Version

ENST00000358105.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000252629 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.