Transcript: ENST00000461096.2 TAF13-001

Description

TAF13 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 18kDa [Source:HGNC Symbol;Acc:11546]

Gene Synonyms

TAF(II)18, TAF2K, TAFII-18, TAFII18

Location

About this transcript

This transcript has 5 exons, is annotated with 5 domains and features, is associated with 7420 variant alleles and maps to 416 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000338366.5	TAF13-002	813	124aa	ENSP00000355051.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS30788	Q15543	NM_005645.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000461096.2	TAF13-001	1076	124aa	ENSP00000433883.1	Nonsense mediated decay	CCDS30788	Q15543	-	-

Summary

Statistics

Exons: 5, Coding exons: 4, Transcript length: 1,076 bps, Translation length: 124 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q15543

CCDS

This transcript is a member of the Human CCDS set: CCDS30788

Version

ENST00000461096.2

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000100608 (version 4)