Transcript: ENST00000372731.4 SPTAN1-004

Description

spectrin, alpha, non-erythrocytic 1 [Source:HGNC Symbol;Acc:11273]

Gene Synonyms

EIEE5, NEAS, SPTA2

Location

Chromosome 9: 131,314,869-131,395,941 forward strand.

About this transcript

This transcript has 56 exons, is annotated with 118 domains and features, is associated with 38647 variant alleles and maps to 1486 oligo probes.

Gene

This transcript is a product of gene ENSG00000197694.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000372739.3	SPTAN1-005	7872	2477aa	ENSP00000361824.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS48036	Q13813	NM_001130438.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000358161.5	SPTAN1-201	7872	2477aa	ENSP00000350882.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A6NG51	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000372731.4	SPTAN1-004	7857	2472aa	ENSP00000361816.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6905	Q13813	NM_003127.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000475367.1	SPTAN1-006	2237	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000491712.1	SPTAN1-003	1018	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000461855.1	SPTAN1-008	857	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000476825.1	SPTAN1-002	626	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000497216.1	SPTAN1-007	348	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000472211.1	SPTAN1-001	269	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 56, Coding exons: 55, Transcript length: 7,857 bps, Translation length: 2,472 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q13813

CCDS

This transcript is a member of the Human CCDS set: CCDS6905

Version

ENST00000372731.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000054472 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000372731.4 SPTAN1-004

Summary