Human (GRCh37.p13)
Description

collagen, type XIII, alpha 1 [Source:HGNC Symbol;Acc:2190]

Gene Synonyms

COLXIIIA1

Location
About this transcript

This transcript has 38 exons, is annotated with 24 domains and features, is associated with 68248 variant alleles and maps to 851 oligo probes.

Gene
Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeqFlags
ENST00000356340.3COL13A1-2013136717aaENSP00000348695.3
 
Protein coding
G5E987 Q9UP45 -GENCODE basic
ENST00000398974.3COL13A1-2093101705aaENSP00000381946.3
 
Protein coding
E7ES46 Q9UP45 -GENCODE basic
ENST00000398972.3COL13A1-2073094703aaENSP00000381944.3
 
Protein coding
E7ES47 Q9UP45 -GENCODE basic
ENST00000398978.3COL13A1-0013093717aaENSP00000381949.3
 
Protein coding
CCDS44419Q5TAT6 Q9UP45 NM_001130103.1GENCODE basic
ENST00000398971.3COL13A1-2063092702aaENSP00000381943.3
 
Protein coding
E7ES49 Q9UP45 -GENCODE basic
ENST00000398968.3COL13A1-2043080698aaENSP00000381940.3
 
Protein coding
E7ES51 Q9UP45 -GENCODE basic
ENST00000398966.3COL13A1-2033071695aaENSP00000381938.3
 
Protein coding
E7ES55 Q9UP45 -GENCODE basic
ENST00000398973.3COL13A1-2083058691aaENSP00000381945.3
 
Protein coding
E9PEG9 Q9UP45 -GENCODE basic
ENST00000398964.3COL13A1-2023050688aaENSP00000381936.3
 
Protein coding
E7ES56 Q9UP45 -GENCODE basic
ENST00000354547.3COL13A1-0023027695aaENSP00000346553.3
 
Protein coding
CCDS44424Q5TAT6 Q9UP45 NM_080801.3GENCODE basic
ENST00000357811.3COL13A1-0042991683aaENSP00000350463.3
 
Protein coding
Q5TAT6 Q9UP45 NM_080802.3GENCODE basic
ENST00000398969.3COL13A1-2052921645aaENSP00000381941.3
 
Protein coding
E7ES50 Q9UP45 -GENCODE basic
ENST00000520267.1COL13A1-0112276645aaENSP00000428057.1
 
Protein coding
CCDS44427Q5TAT6 Q9UP45 NM_080798.3GENCODE basic
ENST00000522165.1COL13A1-0142061686aaENSP00000428342.1
 
Protein coding
CCDS44425Q5TAT6 Q9UP45 NM_080800.3GENCODE basic
ENST00000517713.1COL13A1-0132007668aaENSP00000430061.1
 
Protein coding
CCDS44423Q5TAT6 Q9UP45 -GENCODE basic
ENST00000520133.1COL13A1-0151833610aaENSP00000430173.1
 
Protein coding
CCDS44428Q5TAT6 Q9UP45 NM_080805.3GENCODE basic
ENST00000398975.2COL13A1-0061057247aaENSP00000381947.2
 
Protein coding
--CDS 5' incomplete
ENST00000456019.1COL13A1-008749174aaENSP00000388774.1
 
Protein coding
--CDS 5' incomplete
ENST00000479733.1COL13A1-0032934582aaENSP00000430089.1
 
Nonsense mediated decay
E7EX21 Q9UP45 --
ENST00000484990.1COL13A1-007360No protein-
 
Processed transcript
---
ENST00000518052.1COL13A1-012290No protein-
 
Processed transcript
---
ENST00000478219.1COL13A1-0092586No protein-
 
Retained intron
---
Statistics

Exons: 38, Coding exons: 38, Transcript length: 2,991 bps, Translation length: 683 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q5TAT6

Version

ENST00000357811.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:
OTTHUMT00000048471 (version 1)
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.