Transcript: ENST00000426681.2 PDGFA-004

Description

platelet-derived growth factor alpha polypeptide [Source:HGNC Symbol;Acc:8799]

Gene Synonyms

PDGF-A, PDGF1

Location

About this transcript

This transcript has 3 exons, is associated with 4820 variant alleles and maps to 108 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000402802.3	PDGFA-001	2305	196aa	ENSP00000383889.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS47524	P04085 Q9UGN0	NM_033023.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000354513.5	PDGFA-002	1308	211aa	ENSP00000346508.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS34578	P04085 Q9UGN0	NM_002607.5	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000400761.3	PDGFA-005	689	205aa	ENSP00000383572.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H7BYW6	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000405692.2	PDGFA-006	663	86aa	ENSP00000384673.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000426681.2	PDGFA-004	357	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000482462.1	PDGFA-003	1770	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 357 bps,

Version

ENST00000426681.2

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000322536 (version 2)

Annotation Attributes

dotter confirmed [Definitions]