Transcript: ENST00000328969.5 ZGPAT-006

Description

zinc finger, CCCH-type with G patch domain [Source:HGNC Symbol;Acc:15948]

Gene Synonyms

FLJ14972, GPATC6, GPATCH6, KIAA1847, MGC44880, ZC3H9, ZC3HDC9, ZIP, dJ583P15.3

Location

Chromosome 20: 62,339,442-62,367,493 forward strand.

About this transcript

This transcript has 7 exons, is annotated with 19 domains and features, is associated with 16044 variant alleles and maps to 512 oligo probes.

Gene

This transcript is a product of gene ENSG00000197114.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000328969.5	ZGPAT-006	1945	531aa	ENSP00000332013.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13534	Q8N5A5	NM_032527.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000357119.4	ZGPAT-005	1896	502aa	ENSP00000349634.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS56203	Q8N5A5	NM_001195654.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000369967.3	ZGPAT-003	1890	511aa	ENSP00000358984.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13535	Q8N5A5	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000448100.2	ZGPAT-014	1881	511aa	ENSP00000391176.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13535	Q8N5A5	NM_001083113.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000355969.6	ZGPAT-004	1871	511aa	ENSP00000348242.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13535	Q8N5A5	NM_181485.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000431125.1	ZGPAT-008	427	97aa	ENSP00000403966.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000478385.1	ZGPAT-010	935	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000472711.1	ZGPAT-009	787	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000468235.1	ZGPAT-011	594	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000477340.1	ZGPAT-002	2831	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000484569.1	ZGPAT-001	749	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 7, Coding exons: 6, Transcript length: 1,945 bps, Translation length: 531 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8N5A5

CCDS

This transcript is a member of the Human CCDS set: CCDS13534

Version

ENST00000328969.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000080214 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000328969.5 ZGPAT-006

Summary