Transcript: ENST00000359943.3 FAM3C-001

Description

family with sequence similarity 3, member C [Source:HGNC Symbol;Acc:18664]

Gene Synonyms

GS3876, ILEI

Location

About this transcript

This transcript has 10 exons, is annotated with 4 domains and features, is associated with 19571 variant alleles and maps to 674 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000359943.3	FAM3C-001	2508	227aa	ENSP00000353025.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5782	C9JMN4 C9JP35 Q92520	NM_014888.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000426156.1	FAM3C-004	662	109aa	ENSP00000414940.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JP35	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000412653.1	FAM3C-002	561	151aa	ENSP00000408636.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JMN4 C9JP35	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000497622.1	FAM3C-005	666	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000474082.1	FAM3C-006	567	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 10, Coding exons: 9, Transcript length: 2,508 bps, Translation length: 227 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q92520

CCDS

This transcript is a member of the Human CCDS set: CCDS5782

Version

ENST00000359943.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000346945 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.