Transcript: ENST00000546961.1 SCN8A-002

Description

sodium channel, voltage gated, type VIII, alpha subunit [Source:HGNC Symbol;Acc:10596]

Gene Synonyms

CERIII, CIAT, CerIII, EIEE13, MED, NaCh6, Nav1.6, PN4

Location

About this transcript

This transcript has 2 exons, is associated with 17605 variant alleles and maps to 53 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000354534.6	SCN8A-001	11556	1980aa	ENSP00000346534.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS44891	Q8WWN3 Q9P2Q6 Q9UQD0	NM_014191.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000545061.1	SCN8A-201	6958	1939aa	ENSP00000440360.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS53794	F8VWM7 Q8WWN3 Q9P2Q6 Q9UQD0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000355133.3	SCN8A-005	5820	1557aa	ENSP00000347255.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8VWM7 Q8WWN3	-	-
ENST00000550891.1	SCN8A-003	3253	972aa	ENSP00000448415.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8VRN5 Q6B4S4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000551216.1	SCN8A-004	1627	475aa	ENSP00000447567.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8W0Q0	-	-
ENST00000546961.1	SCN8A-002	465	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000548086.1	SCN8A-006	423	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 465 bps,

Version

ENST00000546961.1

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000404370 (version 1)