Transcript: ENST00000470258.1 NHLRC3-001

Description

NHL repeat containing 3 [Source:HGNC Symbol;Acc:33751]

Gene Synonyms

RP11-50D16.3

Location

About this transcript

This transcript has 7 exons, is annotated with 6 domains and features, is associated with 5190 variant alleles and maps to 481 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000379600.3	NHLRC3-005	3549	347aa	ENSP00000368920.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS31961	C9J973 Q5JS37	NM_001012754.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000470258.1	NHLRC3-001	3298	150aa	ENSP00000418127.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J973	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000379599.2	NHLRC3-002	3275	280aa	ENSP00000368919.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS31962	C9J973 Q5JS37	NM_001017370.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000473371.1	NHLRC3-003	3237	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000485407.1	NHLRC3-004	623	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 7, Coding exons: 3, Transcript length: 3,298 bps, Translation length: 150 residues

Version

ENST00000470258.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000044612 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.