Transcript: ENST00000467511.1 PTAR1-003

Description

protein prenyltransferase alpha subunit repeat containing 1 [Source:HGNC Symbol;Acc:30449]

Location

Chromosome 9: 72,346,848-72,349,174 reverse strand.

About this transcript

This transcript has 2 exons, is associated with 1025 variant alleles and maps to 60 oligo probes.

Gene

This transcript is a product of gene ENSG00000188647.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000377200.5	PTAR1-001	9876	350aa	ENSP00000366405.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5GXY1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000472967.2	PTAR1-004	1689	29aa	ENSP00000440164.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5GXY1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000340434.4	PTAR1-002	1417	402aa	ENSP00000344299.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS47978	Q7Z6K3	NM_001099666.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000415701.2	PTAR1-005	826	168aa	ENSP00000405943.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000474925.2	PTAR1-006	616	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000467511.1	PTAR1-003	530	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 530 bps,

Version

ENST00000467511.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000052583 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000467511.1 PTAR1-003

Summary