Transcript: ENST00000554108.2 C12orf55-008

Description

chromosome 12 open reading frame 55 [Source:HGNC Symbol;Acc:26456]

Gene Synonyms

C12orf63, FLJ31514, FLJ44112

Location

Chromosome 12: 96,933,915-97,037,988 forward strand.

About this transcript

This transcript has 19 exons, is associated with 43959 variant alleles and maps to 557 oligo probes.

Gene

This transcript is a product of gene ENSG00000188596.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	RefSeq	Flags
ENST00000524981.4	C12orf55-003	9766	3096aa	ENSP00000431759.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9PJL5 R4GNI2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000550977.2	C12orf55-004	2756	265aa	ENSP00000449035.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000298953.3	C12orf55-201	2418	805aa	ENSP00000298953.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	I3L078 R4GNI2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000553778.2	C12orf55-002	1967	644aa	ENSP00000452066.2	Non stop decay	G3V4Y4	-	-
ENST00000554108.2	C12orf55-008	2323	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-	-
ENST00000556591.1	C12orf55-007	802	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-	-
ENST00000342887.1	C12orf55-009	3686	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-	-
ENST00000554621.1	C12orf55-005	724	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-	-
ENST00000554821.1	C12orf55-006	474	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-	-

Summary

Statistics

Exons: 19, Coding exons: 0, Transcript length: 2,323 bps,

Version

ENST00000554108.2

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000409787 (version 2)

Favourite species

All species

Recent locations

Transcript: ENST00000554108.2 C12orf55-008

Summary