Human (GRCh37.p13)
Description

focadhesin [Source:HGNC Symbol;Acc:23377]

Gene Synonyms

FLJ20375, KIAA1797

Location
About this transcript

This transcript has 46 exons, is annotated with 20 domains and features, is associated with 170727 variant alleles and maps to 1120 oligo probes.

Gene
Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeqFlags
ENST00000380249.1FOCAD-00160961801aaENSP00000369599.1
 
Protein coding
CCDS34993Q5VW36 S4R3S9 S4R400
S4R450
NM_017794.3GENCODE basic
ENST00000338382.6FOCAD-20157251801aaENSP00000344307.6
 
Protein coding
CCDS34993Q5VW36 S4R3S9 S4R400
S4R450
-GENCODE basic
ENST00000605086.1FOCAD-00241951237aaENSP00000474915.1
 
Protein coding
S4R3S9 S4R400 S4R450
-GENCODE basic
ENST00000603044.1FOCAD-012635128aaENSP00000475075.1
 
Protein coding
S4R3S9 S4R450 -CDS 3' incomplete
ENST00000604254.1FOCAD-013572180aaENSP00000474563.1
 
Protein coding
S4R3N8 -CDS 3' incomplete
ENST00000603695.1FOCAD-01455999aaENSP00000474683.1
 
Protein coding
S4R3S9 -CDS 3' incomplete
ENST00000603648.1FOCAD-00359246aaENSP00000475030.1
 
Nonsense mediated decay
S4R437 --
ENST00000604828.1FOCAD-0051973No protein-
 
Processed transcript
---
ENST00000603844.1FOCAD-004693No protein-
 
Processed transcript
---
ENST00000603631.1FOCAD-015672No protein-
 
Processed transcript
---
ENST00000604103.1FOCAD-007591No protein-
 
Processed transcript
---
ENST00000603492.1FOCAD-009569No protein-
 
Processed transcript
---
ENST00000605031.1FOCAD-006556No protein-
 
Processed transcript
---
ENST00000605852.1FOCAD-011554No protein-
 
Processed transcript
---
ENST00000603552.1FOCAD-010534No protein-
 
Processed transcript
---
ENST00000604036.1FOCAD-008522No protein-
 
Processed transcript
---
ENST00000603610.1FOCAD-016214No protein-
 
Processed transcript
---
Statistics

Exons: 46, Coding exons: 43, Transcript length: 6,096 bps, Translation length: 1,801 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q5VW36

CCDS

This transcript is a member of the Human CCDS set: CCDS34993

Version

ENST00000380249.1

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:
OTTHUMT00000143442 (version 1)
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.