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Description

Fanconi anemia, complementation group A [Source:HGNC Symbol;Acc:3582]

Gene Synonyms

FA, FA-H, FA1, FAA, FACA, FAH, FANCH

Location
About this transcript

This transcript has 6 exons, is annotated with 1 domain and feature, is associated with 4120 variant alleles and maps to 110 oligo probes.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
FANCA-001ENST00000389301.354511455aaENSP00000373952.3
 
Protein coding
CCDS32515H3BT53 O15360 NM_000135
NP_000126
GENCODE basic
FANCA-002ENST00000568369.146011424aaENSP00000456829.1
 
Protein coding
CCDS67099H3BSR5 H3BT53 NM_001286167
NP_001273096
GENCODE basic
FANCA-003ENST00000389302.31641297aaENSP00000373953.3
 
Protein coding
CCDS42221O15360 NM_001018112
NP_001018122
GENCODE basic
FANCA-006ENST00000563673.11694316aaENSP00000456443.1
 
Protein coding
-H3BRX3 -GENCODE basic
FANCA-201ENST00000534992.11088302aaENSP00000443675.1
 
Protein coding
-F5H8D5 -GENCODE basic
FANCA-004ENST00000543736.11000265aaENSP00000443409.1
 
Protein coding
-Q0VAP4 -GENCODE basic
FANCA-028ENST00000564475.1732240aaENSP00000454977.1
 
Protein coding
---CDS 5' incomplete
FANCA-026ENST00000567879.1713214aaENSP00000457006.1
 
Protein coding
-H3BT40 -CDS 5' incomplete
FANCA-027ENST00000561722.1696195aaENSP00000456608.1
 
Protein coding
-H3BSA3 -CDS 5' incomplete
FANCA-030ENST00000564870.1460153aaENSP00000456481.1
 
Protein coding
---CDS 5' and 3' incomplete
FANCA-021ENST00000567988.1915109aaENSP00000454217.1
 
Nonsense mediated decay
---CDS 5' incomplete
FANCA-010ENST00000567943.1860158aaENSP00000455941.1
 
Nonsense mediated decay
-H3BQU1 --
FANCA-012ENST00000565582.1812210aaENSP00000456722.1
 
Nonsense mediated decay
-H3BSI9 -CDS 5' incomplete
FANCA-022ENST00000561660.1762182aaENSP00000456588.1
 
Nonsense mediated decay
---CDS 5' incomplete
FANCA-023ENST00000568626.1727168aaENSP00000455974.1
 
Nonsense mediated decay
---CDS 5' incomplete
FANCA-019ENST00000563510.163351aaENSP00000456993.1
 
Nonsense mediated decay
---CDS 5' incomplete
FANCA-013ENST00000567621.1618125aaENSP00000456762.1
 
Nonsense mediated decay
---CDS 5' incomplete
FANCA-020ENST00000563318.160577aaENSP00000457970.1
 
Nonsense mediated decay
---CDS 5' incomplete
FANCA-011ENST00000563513.1571114aaENSP00000455946.1
 
Nonsense mediated decay
-H3BQU6 --
FANCA-016ENST00000567510.1461101aaENSP00000455969.1
 
Nonsense mediated decay
-H3BQW7 -CDS 5' incomplete
FANCA-008ENST00000567205.141363aaENSP00000457027.1
 
Nonsense mediated decay
-H3BT53 -CDS 5' incomplete
FANCA-007ENST00000566409.139541aaENSP00000457647.1
 
Nonsense mediated decay
---CDS 5' incomplete
FANCA-031ENST00000567284.2479No protein-
 
Processed transcript
----
FANCA-005ENST00000566889.12201No protein-
 
Retained intron
----
FANCA-009ENST00000305699.111430No protein-
 
Retained intron
----
FANCA-024ENST00000564969.1850No protein-
 
Retained intron
----
FANCA-014ENST00000566133.1761No protein-
 
Retained intron
----
FANCA-029ENST00000562424.1745No protein-
 
Retained intron
----
FANCA-025ENST00000568983.1726No protein-
 
Retained intron
----
FANCA-032ENST00000567883.1650No protein-
 
Retained intron
----
FANCA-017ENST00000563767.1578No protein-
 
Retained intron
----
FANCA-018ENST00000561667.1528No protein-
 
Retained intron
----
Statistics

Exons: 6, Coding exons: 4, Transcript length: 571 bps, Translation length: 114 residues

Version

ENST00000563513.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:
OTTHUMT00000422012 (version 1)

Transcript-based displays